Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPC1O15118 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPC1O15118 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPC1O15118 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPC1O15118 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.42■□□□□ 0.54
NPC1O15118 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPC1O15118 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPC1O15118 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.41■□□□□ 0.54
NPC1O15118 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.41■□□□□ 0.54
NPC1O15118 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 TNXA-203ENST00000507684 2038 ntBASIC18.41■□□□□ 0.54
NPC1O15118 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.41■□□□□ 0.54
NPC1O15118 NUS1P2-201ENST00000417358 873 ntBASIC18.41■□□□□ 0.54
NPC1O15118 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.41■□□□□ 0.54
NPC1O15118 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.41■□□□□ 0.54
NPC1O15118 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.41■□□□□ 0.54
NPC1O15118 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.41■□□□□ 0.54
NPC1O15118 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.41■□□□□ 0.54
NPC1O15118 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.41■□□□□ 0.54
NPC1O15118 AC114341.1-201ENST00000618070 349 ntBASIC18.41■□□□□ 0.54
NPC1O15118 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.41■□□□□ 0.54
NPC1O15118 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPC1O15118 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.4■□□□□ 0.54
NPC1O15118 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
NPC1O15118 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.4■□□□□ 0.54
NPC1O15118 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.4■□□□□ 0.54
NPC1O15118 AC068472.1-201ENST00000474589 881 ntBASIC18.4■□□□□ 0.54
NPC1O15118 AC091607.1-201ENST00000490318 1060 ntBASIC18.4■□□□□ 0.54
NPC1O15118 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.4■□□□□ 0.54
NPC1O15118 AP002469.2-201ENST00000531724 424 ntBASIC18.4■□□□□ 0.54
NPC1O15118 BNIP3P18-201ENST00000593976 575 ntBASIC18.4■□□□□ 0.54
NPC1O15118 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NPC1O15118 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NPC1O15118 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
NPC1O15118 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
NPC1O15118 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPC1O15118 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPC1O15118 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPC1O15118 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.39■□□□□ 0.54
NPC1O15118 CROCCP3-202ENST00000420820 1947 ntBASIC18.39■□□□□ 0.53
NPC1O15118 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPC1O15118 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.39■□□□□ 0.53
NPC1O15118 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
NPC1O15118 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.39■□□□□ 0.53
NPC1O15118 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NPC1O15118 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 AC079781.3-201ENST00000449110 356 ntBASIC18.39■□□□□ 0.53
NPC1O15118 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.39■□□□□ 0.53
NPC1O15118 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.39■□□□□ 0.53
NPC1O15118 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.39■□□□□ 0.53
NPC1O15118 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.39■□□□□ 0.53
NPC1O15118 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPC1O15118 AL591684.3-201ENST00000605187 298 ntBASIC18.39■□□□□ 0.53
NPC1O15118 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.39■□□□□ 0.53
NPC1O15118 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
NPC1O15118 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
NPC1O15118 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPC1O15118 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NPC1O15118 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.38■□□□□ 0.53
NPC1O15118 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPC1O15118 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPC1O15118 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms