Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPEO14579 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
COPEO14579 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.33■□□□□ 0.52
COPEO14579 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPEO14579 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.33■□□□□ 0.52
COPEO14579 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
COPEO14579 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COPEO14579 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPEO14579 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.52
COPEO14579 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPEO14579 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.32■□□□□ 0.52
COPEO14579 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.32■□□□□ 0.52
COPEO14579 KSR1P1-201ENST00000446298 240 ntBASIC18.32■□□□□ 0.52
COPEO14579 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.32■□□□□ 0.52
COPEO14579 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPEO14579 AC124016.1-201ENST00000609552 612 ntBASIC18.32■□□□□ 0.52
COPEO14579 AC110285.5-201ENST00000611501 352 ntBASIC18.32■□□□□ 0.52
COPEO14579 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.32■□□□□ 0.52
COPEO14579 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COPEO14579 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.32■□□□□ 0.52
COPEO14579 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.32■□□□□ 0.52
COPEO14579 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.32■□□□□ 0.52
COPEO14579 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.32■□□□□ 0.52
COPEO14579 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COPEO14579 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPEO14579 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COPEO14579 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
COPEO14579 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COPEO14579 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COPEO14579 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COPEO14579 MIR564-202ENST00000385049 94 ntBASIC18.31■□□□□ 0.52
COPEO14579 RNA5SP413-201ENST00000516373 109 ntBASIC18.31■□□□□ 0.52
COPEO14579 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.31■□□□□ 0.52
COPEO14579 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.31■□□□□ 0.52
COPEO14579 AL353708.3-201ENST00000610272 989 ntBASIC18.31■□□□□ 0.52
COPEO14579 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
COPEO14579 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COPEO14579 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPEO14579 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.31■□□□□ 0.52
COPEO14579 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.3■□□□□ 0.52
COPEO14579 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COPEO14579 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.3■□□□□ 0.52
COPEO14579 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COPEO14579 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 FAM207BP-201ENST00000447172 505 ntBASIC18.3■□□□□ 0.52
COPEO14579 AC133681.1-201ENST00000465482 601 ntBASIC18.3■□□□□ 0.52
COPEO14579 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.3■□□□□ 0.52
COPEO14579 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.3■□□□□ 0.52
COPEO14579 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.3■□□□□ 0.52
COPEO14579 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COPEO14579 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.3■□□□□ 0.52
COPEO14579 AL645608.8-201ENST00000606034 2086 ntBASIC18.3■□□□□ 0.52
COPEO14579 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.3■□□□□ 0.52
COPEO14579 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.3■□□□□ 0.52
COPEO14579 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COPEO14579 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.3■□□□□ 0.52
COPEO14579 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPEO14579 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
COPEO14579 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
COPEO14579 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COPEO14579 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COPEO14579 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 KRT16P1-201ENST00000399124 1418 ntBASIC18.29■□□□□ 0.52
COPEO14579 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COPEO14579 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms