Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.34■□□□□ 0.37
UPK1AO00322 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 AC128688.1-201ENST00000487626 519 ntBASIC17.34■□□□□ 0.37
UPK1AO00322 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 WWOX-216ENST00000569818 525 ntBASIC17.34■□□□□ 0.37
UPK1AO00322 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UPK1AO00322 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.34■□□□□ 0.37
UPK1AO00322 AC080080.1-201ENST00000625121 2420 ntBASIC17.34■□□□□ 0.37
UPK1AO00322 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1AO00322 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1AO00322 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.33■□□□□ 0.37
UPK1AO00322 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
UPK1AO00322 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1AO00322 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UPK1AO00322 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
UPK1AO00322 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.33■□□□□ 0.36
UPK1AO00322 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.33■□□□□ 0.36
UPK1AO00322 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.33■□□□□ 0.36
UPK1AO00322 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.33■□□□□ 0.36
UPK1AO00322 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UPK1AO00322 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UPK1AO00322 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
UPK1AO00322 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1AO00322 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
UPK1AO00322 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UPK1AO00322 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.32■□□□□ 0.36
UPK1AO00322 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UPK1AO00322 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 KRT8P50-201ENST00000562022 1438 ntBASIC17.32■□□□□ 0.36
UPK1AO00322 REXO1L9P-201ENST00000604264 2108 ntBASIC17.32■□□□□ 0.36
UPK1AO00322 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UPK1AO00322 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK1AO00322 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK1AO00322 AP000593.1-201ENST00000393668 712 ntBASIC17.32■□□□□ 0.36
UPK1AO00322 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UPK1AO00322 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.32■□□□□ 0.36
UPK1AO00322 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.32■□□□□ 0.36
UPK1AO00322 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
UPK1AO00322 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
UPK1AO00322 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK1AO00322 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.32■□□□□ 0.36
UPK1AO00322 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1AO00322 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms