Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 MIR662-201ENST00000384847 95 ntBASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 AL136038.4-201ENST00000603606 1261 ntBASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 AC012313.10-201ENST00000623509 926 ntBASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 AC020763.4-201ENST00000623414 4170 ntBASIC17.94■□□□□ 0.46
TMX2-CTNND1H3BSU7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 AL109659.2-201ENST00000606809 1674 ntBASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 AL391807.1-203ENST00000604392 2365 ntBASIC17.93■□□□□ 0.46
TMX2-CTNND1H3BSU7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.92■□□□□ 0.46
TMX2-CTNND1H3BSU7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms