Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 AL096828.2-201ENST00000567259 1965 ntBASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 KRT8P32-201ENST00000512863 1461 ntBASIC13.38□□□□□ -0.27
SMKR1H3BMG3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 UBALD1-205ENST00000590891 2641 ntBASIC13.38□□□□□ -0.27
SMKR1H3BMG3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SMKR1H3BMG3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.37□□□□□ -0.27
SMKR1H3BMG3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms