Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 AL499627.1-201ENST00000569373 2188 ntBASIC13.02□□□□□ -0.33
LINC01549A6NIU2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 KRT8P3-201ENST00000519669 1449 ntBASIC13.02□□□□□ -0.33
LINC01549A6NIU2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 KRT17P1-201ENST00000399211 1546 ntBASIC13.02□□□□□ -0.33
LINC01549A6NIU2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 GMCL1P1-201ENST00000463439 1581 ntBASIC13.02□□□□□ -0.33
LINC01549A6NIU2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 AC005181.1-201ENST00000604782 1256 ntBASIC13.01□□□□□ -0.33
LINC01549A6NIU2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01549A6NIU2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 AC108860.2-201ENST00000562760 2183 ntBASIC13□□□□□ -0.33
LINC01549A6NIU2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 KRT18P55-202ENST00000578578 1546 ntBASIC13□□□□□ -0.33
LINC01549A6NIU2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LINC01549A6NIU2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13□□□□□ -0.33
LINC01549A6NIU2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13□□□□□ -0.33
LINC01549A6NIU2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 DBI-210ENST00000542275 757 ntTSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 AC131212.1-201ENST00000613771 668 ntBASIC13□□□□□ -0.33
LINC01549A6NIU2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms