Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 AC099336.1-202ENST00000602961 463 ntBASIC26.94■■□□□ 1.9
HFM1A2PYH4 AC138894.3-201ENST00000603787 634 ntBASIC26.94■■□□□ 1.9
HFM1A2PYH4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC26.94■■□□□ 1.9
HFM1A2PYH4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HFM1A2PYH4 EFTUD1P1-204ENST00000560401 1798 ntBASIC26.94■■□□□ 1.9
HFM1A2PYH4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC26.94■■□□□ 1.9
HFM1A2PYH4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC090164.3-201ENST00000610780 2143 ntBASIC26.93■■□□□ 1.9
HFM1A2PYH4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
HFM1A2PYH4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
HFM1A2PYH4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC112698.1-201ENST00000510299 916 ntBASIC26.93■■□□□ 1.9
HFM1A2PYH4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC011840.4-201ENST00000578471 627 ntBASIC26.93■■□□□ 1.9
HFM1A2PYH4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
HFM1A2PYH4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC009113.1-201ENST00000570267 2443 ntBASIC26.93■■□□□ 1.9
HFM1A2PYH4 AC135776.1-201ENST00000319817 2481 ntBASIC26.93■■□□□ 1.9
HFM1A2PYH4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
HFM1A2PYH4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 UNC93B7-201ENST00000509439 705 ntBASIC26.92■■□□□ 1.9
HFM1A2PYH4 FOSL1P1-201ENST00000511041 816 ntBASIC26.92■■□□□ 1.9
HFM1A2PYH4 DUTP2-201ENST00000519164 463 ntBASIC26.92■■□□□ 1.9
HFM1A2PYH4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 FICD-205ENST00000552758 603 ntTSL 2 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 AC114341.1-201ENST00000618070 349 ntBASIC26.92■■□□□ 1.9
HFM1A2PYH4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HFM1A2PYH4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
HFM1A2PYH4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HFM1A2PYH4 AC125634.1-201ENST00000438758 1403 ntBASIC26.91■■□□□ 1.9
HFM1A2PYH4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HFM1A2PYH4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC26.91■■□□□ 1.9
HFM1A2PYH4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC26.91■■□□□ 1.9
HFM1A2PYH4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
HFM1A2PYH4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC26.91■■□□□ 1.9
HFM1A2PYH4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC26.91■■□□□ 1.9
HFM1A2PYH4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.91■■□□□ 1.9
HFM1A2PYH4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
HFM1A2PYH4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
HFM1A2PYH4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HFM1A2PYH4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 KRT18P31-201ENST00000506277 1292 ntBASIC26.9■■□□□ 1.9
HFM1A2PYH4 AC111152.3-201ENST00000569699 673 ntBASIC26.9■■□□□ 1.9
HFM1A2PYH4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HFM1A2PYH4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC26.9■■□□□ 1.9
HFM1A2PYH4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms