Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 KRT18P38-201ENST00000449496 1282 ntBASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 KRT18P55-202ENST00000578578 1546 ntBASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 KRT89P-201ENST00000620027 1478 ntBASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 AC113404.2-201ENST00000507884 177 ntBASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV5S1A1TA0A578 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 AC104076.2-201ENST00000448912 469 ntBASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 AC092597.1-201ENST00000487352 616 ntBASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 AL136038.4-201ENST00000603606 1261 ntBASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 HYMAI.1-201ENST00000620949 238 ntBASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV5S1A1TA0A578 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 AC005332.8-201ENST00000622750 2735 ntBASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 RCN1P1-201ENST00000400413 996 ntBASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 TSPY5P-201ENST00000426936 936 ntBASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 AC006116.8-202ENST00000587620 1550 ntBASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms