Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 AC116562.2-201ENST00000507042 360 ntBASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 AC097488.1-201ENST00000507834 756 ntBASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 MIR3180-5-201ENST00000583743 153 ntBASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 KRT18P29-201ENST00000397031 1267 ntBASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 NUDT16P1-203ENST00000513809 620 ntBASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 PHGDH-209ENST00000641074 1780 ntBASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00959A0A1B0GUT2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00959A0A1B0GUT2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00959A0A1B0GUT2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms