Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 AC141586.5-201ENST00000624546 2050 ntBASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 PP12613-201ENST00000424958 2230 ntBASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 GMCL1P1-201ENST00000463439 1581 ntBASIC15.75■□□□□ 0.11
TRAV18A0A075B6X5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 AC124067.4-201ENST00000519691 2379 ntBASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 PRSS44-201ENST00000515154 1146 ntBASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 FER1L4-210ENST00000615531 5998 ntBASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV18A0A075B6X5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 AD000864.1-201ENST00000624076 2295 ntBASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms