Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KRT8P41-201ENST00000533985 1514 ntBASIC22■■□□□ 1.11
DDX49Q9Y6V7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 AL160286.2-201ENST00000567150 934 ntBASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 AC139887.4-201ENST00000607877 719 ntBASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 AC073592.3-201ENST00000625118 1834 ntBASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DDX49Q9Y6V7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 AC007663.1-201ENST00000438948 1240 ntBASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX49Q9Y6V7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 AC087388.1-201ENST00000571370 1112 ntBASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX49Q9Y6V7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 AK4P3-201ENST00000418260 669 ntBASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 AL138966.2-201ENST00000621997 464 ntBASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX49Q9Y6V7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms