Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 AC079781.3-201ENST00000449110 356 ntBASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 IGHV3-41-201ENST00000613121 348 ntBASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA9Q9Y5G4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 GPR32P1-201ENST00000601788 811 ntBASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA9Q9Y5G4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGA9Q9Y5G4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 AC034236.2-201ENST00000606662 1610 ntBASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 AC233702.3-201ENST00000578656 1387 ntBASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms