Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.33■□□□□ 0.36
AP4S1Q9Y587 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.33■□□□□ 0.36
AP4S1Q9Y587 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 LINC00602-201ENST00000629776 2065 ntBASIC17.33■□□□□ 0.36
AP4S1Q9Y587 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
AP4S1Q9Y587 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.32■□□□□ 0.36
AP4S1Q9Y587 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 AL118508.1-201ENST00000613502 2345 ntBASIC17.32■□□□□ 0.36
AP4S1Q9Y587 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4S1Q9Y587 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 MIR638-201ENST00000385237 100 ntBASIC17.31■□□□□ 0.36
AP4S1Q9Y587 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 AL121832.2-201ENST00000610979 668 ntBASIC17.31■□□□□ 0.36
AP4S1Q9Y587 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 GMCL1P1-201ENST00000463439 1581 ntBASIC17.31■□□□□ 0.36
AP4S1Q9Y587 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.31■□□□□ 0.36
AP4S1Q9Y587 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 FER1L4-210ENST00000615531 5998 ntBASIC17.3■□□□□ 0.36
AP4S1Q9Y587 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 AL121761.2-201ENST00000598007 1648 ntBASIC17.3■□□□□ 0.36
AP4S1Q9Y587 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms