Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 RNA5SP419-201ENST00000515908 135 ntBASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORCS3Q9UPU3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 AF238378.1-201ENST00000526806 358 ntBASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 SLC25A1P1-201ENST00000528351 927 ntBASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SORCS3Q9UPU3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 CROCCP3-202ENST00000420820 1947 ntBASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 TP73-AS1-207ENST00000624167 988 ntBASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORCS3Q9UPU3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SORCS3Q9UPU3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SORCS3Q9UPU3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SORCS3Q9UPU3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SORCS3Q9UPU3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SORCS3Q9UPU3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms