Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 NUS1P1-201ENST00000446295 882 ntBASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 TPSP2-201ENST00000561760 610 ntBASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
HDAC6Q9UBN7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 DRAXINP1-201ENST00000437611 948 ntBASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 Z83836.1-201ENST00000624605 1642 ntBASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 AC020763.4-201ENST00000623414 4170 ntBASIC20.66■□□□□ 0.9
HDAC6Q9UBN7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HDAC6Q9UBN7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms