Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RAP2CP1-201ENST00000605103 478 ntBASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 AL096828.2-201ENST00000567259 1965 ntBASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 AC011767.1-201ENST00000617410 1153 ntBASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD3Q9UBI1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 AL512625.2-201ENST00000417533 625 ntBASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 AC006116.8-202ENST00000587620 1550 ntBASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD3Q9UBI1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 KRT8P32-201ENST00000512863 1461 ntBASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COMMD3Q9UBI1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms