Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 VENTXP7-201ENST00000475503 772 ntBASIC20.65■□□□□ 0.9
COL20A1Q9P218 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.65■□□□□ 0.9
COL20A1Q9P218 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.65■□□□□ 0.9
COL20A1Q9P218 ESPNP-201ENST00000270691 2015 ntBASIC20.65■□□□□ 0.9
COL20A1Q9P218 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL20A1Q9P218 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.64■□□□□ 0.9
COL20A1Q9P218 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL20A1Q9P218 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.64■□□□□ 0.9
COL20A1Q9P218 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL20A1Q9P218 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 FDX1P1-201ENST00000449115 551 ntBASIC20.64■□□□□ 0.89
COL20A1Q9P218 KRT16P4-201ENST00000453883 522 ntBASIC20.64■□□□□ 0.89
COL20A1Q9P218 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 AC009154.2-201ENST00000621177 724 ntBASIC20.64■□□□□ 0.89
COL20A1Q9P218 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL20A1Q9P218 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.64■□□□□ 0.89
COL20A1Q9P218 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 FAAHP1-202ENST00000446499 1238 ntBASIC20.63■□□□□ 0.89
COL20A1Q9P218 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 MINOS1P3-201ENST00000457048 203 ntBASIC20.63■□□□□ 0.89
COL20A1Q9P218 AC009078.2-202ENST00000463353 338 ntBASIC20.63■□□□□ 0.89
COL20A1Q9P218 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL20A1Q9P218 AC132938.6-201ENST00000623828 1655 ntBASIC20.63■□□□□ 0.89
COL20A1Q9P218 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
COL20A1Q9P218 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 MTCL1P1-201ENST00000446207 792 ntBASIC20.62■□□□□ 0.89
COL20A1Q9P218 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
COL20A1Q9P218 GMCL1P1-201ENST00000463439 1581 ntBASIC20.62■□□□□ 0.89
COL20A1Q9P218 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL20A1Q9P218 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL20A1Q9P218 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL20A1Q9P218 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL20A1Q9P218 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.61■□□□□ 0.89
COL20A1Q9P218 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL20A1Q9P218 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.61■□□□□ 0.89
COL20A1Q9P218 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL20A1Q9P218 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL20A1Q9P218 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms