Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HACD3Q9P035 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.54■□□□□ 0.56
HACD3Q9P035 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HACD3Q9P035 BICD1-207ENST00000551848 1962 ntBASIC18.54■□□□□ 0.56
HACD3Q9P035 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HACD3Q9P035 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.54■□□□□ 0.56
HACD3Q9P035 BX664615.1-201ENST00000443558 458 ntBASIC18.54■□□□□ 0.56
HACD3Q9P035 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.54■□□□□ 0.56
HACD3Q9P035 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.54■□□□□ 0.56
HACD3Q9P035 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HACD3Q9P035 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.54■□□□□ 0.56
HACD3Q9P035 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HACD3Q9P035 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 AC092865.7-201ENST00000641832 219 ntBASIC18.54■□□□□ 0.56
HACD3Q9P035 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HACD3Q9P035 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.54■□□□□ 0.56
HACD3Q9P035 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HACD3Q9P035 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 MIR149-201ENST00000384879 89 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.53■□□□□ 0.56
HACD3Q9P035 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.53■□□□□ 0.56
HACD3Q9P035 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 SEC1P-202ENST00000473944 940 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 COX11P1-201ENST00000489116 835 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.53■□□□□ 0.56
HACD3Q9P035 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 AC010240.3-201ENST00000607688 395 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 AC073508.3-201ENST00000619697 1419 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 OR6D1P-202ENST00000641007 5290 ntBASIC18.53■□□□□ 0.56
HACD3Q9P035 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HACD3Q9P035 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.53■□□□□ 0.56
HACD3Q9P035 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
HACD3Q9P035 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.52■□□□□ 0.56
HACD3Q9P035 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.52■□□□□ 0.56
HACD3Q9P035 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.52■□□□□ 0.56
HACD3Q9P035 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.52■□□□□ 0.56
HACD3Q9P035 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.52■□□□□ 0.56
HACD3Q9P035 AC005521.1-201ENST00000393351 872 ntBASIC18.52■□□□□ 0.56
HACD3Q9P035 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.52■□□□□ 0.56
HACD3Q9P035 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HACD3Q9P035 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.52■□□□□ 0.56
HACD3Q9P035 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.52■□□□□ 0.56
HACD3Q9P035 AC140113.3-201ENST00000605663 199 ntBASIC18.52■□□□□ 0.56
HACD3Q9P035 AC024243.1-201ENST00000609234 778 ntBASIC18.52■□□□□ 0.56
HACD3Q9P035 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.52■□□□□ 0.56
HACD3Q9P035 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HACD3Q9P035 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HACD3Q9P035 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HACD3Q9P035 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.52■□□□□ 0.55
HACD3Q9P035 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HACD3Q9P035 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.52■□□□□ 0.55
HACD3Q9P035 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.52■□□□□ 0.55
HACD3Q9P035 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HACD3Q9P035 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.51■□□□□ 0.55
HACD3Q9P035 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HACD3Q9P035 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms