Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 STARP1-201ENST00000397973 869 ntBASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NCKIPSDQ9NZQ3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 KRT18P56-201ENST00000507275 550 ntBASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 AL136038.3-201ENST00000561909 1096 ntBASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.52■□□□□ 0.56
NCKIPSDQ9NZQ3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKIPSDQ9NZQ3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 ABALON-201ENST00000629058 1903 ntBASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 VENTXP5-201ENST00000523979 775 ntBASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 AC126763.1-201ENST00000552015 2118 ntBASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.51■□□□□ 0.55
NCKIPSDQ9NZQ3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 HEIH-201ENST00000623091 1652 ntBASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms