Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 ZNF444P1-201ENST00000559497 298 ntBASIC21.22■□□□□ 0.99
RBM28Q9NW13 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 PHGDH-209ENST00000641074 1780 ntBASIC21.22■□□□□ 0.99
RBM28Q9NW13 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBM28Q9NW13 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBM28Q9NW13 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBM28Q9NW13 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBM28Q9NW13 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBM28Q9NW13 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBM28Q9NW13 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.22■□□□□ 0.99
RBM28Q9NW13 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 AL031133.1-201ENST00000406807 723 ntBASIC21.21■□□□□ 0.99
RBM28Q9NW13 KRT18P48-201ENST00000434763 852 ntBASIC21.21■□□□□ 0.99
RBM28Q9NW13 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 AC113404.2-201ENST00000507884 177 ntBASIC21.21■□□□□ 0.99
RBM28Q9NW13 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBM28Q9NW13 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
RBM28Q9NW13 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RBM28Q9NW13 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 SPDYE13P-201ENST00000445314 798 ntBASIC21.2■□□□□ 0.98
RBM28Q9NW13 VENTXP5-201ENST00000523979 775 ntBASIC21.2■□□□□ 0.98
RBM28Q9NW13 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 AC135050.7-201ENST00000624508 2218 ntBASIC21.2■□□□□ 0.98
RBM28Q9NW13 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.2■□□□□ 0.98
RBM28Q9NW13 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBM28Q9NW13 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.19■□□□□ 0.98
RBM28Q9NW13 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM28Q9NW13 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms