Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 MIR662-201ENST00000384847 95 ntBASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 KRT89P-201ENST00000620027 1478 ntBASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.28■■□□□ 1.16
ECHDC1Q9NTX5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 AL096828.2-201ENST00000567259 1965 ntBASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 AL031133.1-201ENST00000406807 723 ntBASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 AC008687.5-201ENST00000593746 558 ntBASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ECHDC1Q9NTX5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
ECHDC1Q9NTX5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.15
ECHDC1Q9NTX5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 ZNF444P1-201ENST00000559497 298 ntBASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 RNF165-205ENST00000588679 2904 ntBASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ECHDC1Q9NTX5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 AC093010.1-201ENST00000473625 1624 ntBASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.25■■□□□ 1.15
ECHDC1Q9NTX5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms