Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 FSCN1P1-201ENST00000568912 1481 ntBASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 KRT8P50-201ENST00000562022 1438 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 AL023284.2-201ENST00000405850 579 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 KRT18P6-201ENST00000555540 1265 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 AF186192.3-201ENST00000583427 947 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 AP000692.2-201ENST00000608391 879 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 AC073648.6-201ENST00000641589 218 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CDC42SE2Q9NRR3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 SIRPAP1-201ENST00000448467 1770 ntBASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 RARRES2P10-201ENST00000564312 460 ntBASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CDC42SE2Q9NRR3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms