Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.2■□□□□ 0.34
PRTFDC1Q9NRG1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 KRT18P48-201ENST00000434763 852 ntBASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 AL136038.3-201ENST00000561909 1096 ntBASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRTFDC1Q9NRG1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 MIR662-201ENST00000384847 95 ntBASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 SPDYE13P-201ENST00000445314 798 ntBASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 AC008687.5-201ENST00000593746 558 ntBASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 AL024508.2-201ENST00000607749 1894 ntBASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRTFDC1Q9NRG1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRTFDC1Q9NRG1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms