Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RASA4DP-201ENST00000460726 1199 ntBASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 AC111152.3-201ENST00000569699 673 ntBASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 MIR4674-201ENST00000582457 87 ntBASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 CR769767.2-201ENST00000622735 460 ntBASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
POLR1BQ9H9Y6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 AC004870.1-201ENST00000315132 882 ntBASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR1BQ9H9Y6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 TSSC2-201ENST00000450217 709 ntBASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 BX276092.5-203ENST00000456199 560 ntBASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 AL121672.3-201ENST00000608644 468 ntBASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR1BQ9H9Y6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR1BQ9H9Y6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms