Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 C2orf69P4-201ENST00000565394 541 ntBASIC17.46■□□□□ 0.39
VCX3BQ9H321 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 AC016405.3-201ENST00000607710 860 ntBASIC17.46■□□□□ 0.39
VCX3BQ9H321 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 MTMR9LP-203ENST00000426597 1545 ntBASIC17.46■□□□□ 0.39
VCX3BQ9H321 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VCX3BQ9H321 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.38
VCX3BQ9H321 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
VCX3BQ9H321 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
VCX3BQ9H321 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
VCX3BQ9H321 AC008556.1-201ENST00000610908 2040 ntBASIC17.45■□□□□ 0.38
VCX3BQ9H321 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 AP001330.3-201ENST00000520123 633 ntBASIC17.45■□□□□ 0.38
VCX3BQ9H321 MIR6084-201ENST00000622012 110 ntBASIC17.45■□□□□ 0.38
VCX3BQ9H321 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCX3BQ9H321 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VCX3BQ9H321 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.44■□□□□ 0.38
VCX3BQ9H321 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 AL136116.3-201ENST00000402907 1138 ntBASIC17.44■□□□□ 0.38
VCX3BQ9H321 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 TERF1P5-201ENST00000477545 1207 ntBASIC17.44■□□□□ 0.38
VCX3BQ9H321 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.44■□□□□ 0.38
VCX3BQ9H321 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCX3BQ9H321 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.44■□□□□ 0.38
VCX3BQ9H321 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.43■□□□□ 0.38
VCX3BQ9H321 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 PCDH8P1-201ENST00000428983 2773 ntBASIC17.43■□□□□ 0.38
VCX3BQ9H321 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCX3BQ9H321 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms