Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.45■□□□□ 0.54
VPS11Q9H270 AC128676.1-201ENST00000454392 318 ntBASIC18.45■□□□□ 0.54
VPS11Q9H270 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
VPS11Q9H270 AC026271.3-201ENST00000571884 352 ntBASIC18.45■□□□□ 0.54
VPS11Q9H270 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS11Q9H270 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
VPS11Q9H270 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VPS11Q9H270 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.45■□□□□ 0.54
VPS11Q9H270 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VPS11Q9H270 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS11Q9H270 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VPS11Q9H270 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS11Q9H270 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 AC011506.1-201ENST00000474329 610 ntBASIC18.44■□□□□ 0.54
VPS11Q9H270 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 AC130371.2-201ENST00000619443 611 ntBASIC18.44■□□□□ 0.54
VPS11Q9H270 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.44■□□□□ 0.54
VPS11Q9H270 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VPS11Q9H270 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VPS11Q9H270 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VPS11Q9H270 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS11Q9H270 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS11Q9H270 AC009053.2-201ENST00000563701 2365 ntBASIC18.44■□□□□ 0.54
VPS11Q9H270 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VPS11Q9H270 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.43■□□□□ 0.54
VPS11Q9H270 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS11Q9H270 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS11Q9H270 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.43■□□□□ 0.54
VPS11Q9H270 AF186192.3-201ENST00000583427 947 ntBASIC18.43■□□□□ 0.54
VPS11Q9H270 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 AL645608.8-201ENST00000606034 2086 ntBASIC18.43■□□□□ 0.54
VPS11Q9H270 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS11Q9H270 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS11Q9H270 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS11Q9H270 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS11Q9H270 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS11Q9H270 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS11Q9H270 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
VPS11Q9H270 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VPS11Q9H270 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 AC073195.1-201ENST00000607241 877 ntBASIC18.42■□□□□ 0.54
VPS11Q9H270 MIR6786-201ENST00000616843 113 ntBASIC18.42■□□□□ 0.54
VPS11Q9H270 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms