Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 AP000593.1-201ENST00000393668 712 ntBASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 KRT18P55-202ENST00000578578 1546 ntBASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
KRTAP3-1Q9BYR8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 LINC00602-201ENST00000629776 2065 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AL023284.2-201ENST00000405850 579 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 KRT17P3-201ENST00000420566 1262 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AC011506.1-201ENST00000474329 610 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AC121493.1-201ENST00000602316 450 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AL391001.1-201ENST00000602747 715 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AC124016.1-201ENST00000609552 612 ntBASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP3-1Q9BYR8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 AC011676.5-201ENST00000624864 2660 ntBASIC9.28□□□□□ -0.92
KRTAP3-1Q9BYR8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms