Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TCAP-202ENST00000578283 583 ntTSL 5 BASIC24.26■■□□□ 1.47
ABCA3Q99758 AC092865.6-201ENST00000642101 219 ntBASIC24.26■■□□□ 1.47
ABCA3Q99758 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ABCA3Q99758 PMPCAP1-201ENST00000508114 1576 ntBASIC24.26■■□□□ 1.47
ABCA3Q99758 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ABCA3Q99758 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC24.25■■□□□ 1.47
ABCA3Q99758 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ABCA3Q99758 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC24.25■■□□□ 1.47
ABCA3Q99758 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC24.25■■□□□ 1.47
ABCA3Q99758 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.25■■□□□ 1.47
ABCA3Q99758 MIR4469-201ENST00000583919 79 ntBASIC24.25■■□□□ 1.47
ABCA3Q99758 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC24.25■■□□□ 1.47
ABCA3Q99758 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
ABCA3Q99758 AL513190.1-201ENST00000621254 727 ntBASIC24.25■■□□□ 1.47
ABCA3Q99758 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ABCA3Q99758 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ABCA3Q99758 LINC01126-201ENST00000623515 1646 ntBASIC24.25■■□□□ 1.47
ABCA3Q99758 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ABCA3Q99758 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.24■■□□□ 1.47
ABCA3Q99758 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 CNN2P11-201ENST00000429351 262 ntBASIC24.24■■□□□ 1.47
ABCA3Q99758 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC24.24■■□□□ 1.47
ABCA3Q99758 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC24.24■■□□□ 1.47
ABCA3Q99758 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.24■■□□□ 1.47
ABCA3Q99758 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.24■■□□□ 1.47
ABCA3Q99758 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.24■■□□□ 1.47
ABCA3Q99758 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC24.24■■□□□ 1.47
ABCA3Q99758 PGM5P2-202ENST00000637225 1043 ntBASIC24.24■■□□□ 1.47
ABCA3Q99758 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
ABCA3Q99758 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.23■■□□□ 1.47
ABCA3Q99758 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 AC097374.2-201ENST00000618617 1306 ntBASIC24.23■■□□□ 1.47
ABCA3Q99758 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.23■■□□□ 1.47
ABCA3Q99758 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.23■■□□□ 1.47
ABCA3Q99758 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.23■■□□□ 1.47
ABCA3Q99758 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC24.23■■□□□ 1.47
ABCA3Q99758 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC24.23■■□□□ 1.47
ABCA3Q99758 AC005829.1-201ENST00000570002 483 ntBASIC24.23■■□□□ 1.47
ABCA3Q99758 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC24.23■■□□□ 1.47
ABCA3Q99758 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC24.23■■□□□ 1.47
ABCA3Q99758 AC011467.4-201ENST00000594891 528 ntBASIC24.23■■□□□ 1.47
ABCA3Q99758 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.23■■□□□ 1.47
ABCA3Q99758 AC010460.3-201ENST00000511359 1579 ntBASIC24.23■■□□□ 1.47
ABCA3Q99758 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ABCA3Q99758 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
ABCA3Q99758 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.23■■□□□ 1.47
ABCA3Q99758 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
ABCA3Q99758 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.22■■□□□ 1.47
ABCA3Q99758 ELL2P1-201ENST00000413990 1906 ntBASIC24.22■■□□□ 1.47
ABCA3Q99758 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC24.22■■□□□ 1.47
ABCA3Q99758 FAM8A3P-201ENST00000427218 844 ntBASIC24.22■■□□□ 1.47
ABCA3Q99758 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC24.22■■□□□ 1.47
ABCA3Q99758 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC24.22■■□□□ 1.47
ABCA3Q99758 MKNK2P1-201ENST00000437526 628 ntBASIC24.22■■□□□ 1.47
ABCA3Q99758 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
ABCA3Q99758 KRT8P47-201ENST00000604727 1398 ntBASIC24.22■■□□□ 1.47
ABCA3Q99758 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 AL157384.1-201ENST00000445995 2473 ntBASIC24.22■■□□□ 1.47
ABCA3Q99758 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC24.22■■□□□ 1.47
ABCA3Q99758 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC24.22■■□□□ 1.47
ABCA3Q99758 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.22■■□□□ 1.47
ABCA3Q99758 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.22■■□□□ 1.47
ABCA3Q99758 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ABCA3Q99758 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ABCA3Q99758 TSEN15P1-201ENST00000423257 515 ntBASIC24.21■■□□□ 1.47
ABCA3Q99758 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ABCA3Q99758 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.21■■□□□ 1.47
ABCA3Q99758 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.21■■□□□ 1.47
ABCA3Q99758 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.21■■□□□ 1.47
ABCA3Q99758 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
ABCA3Q99758 AC148477.5-201ENST00000625164 1645 ntBASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms