Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.15■□□□□ 0.02
S1PR3Q99500 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.15■□□□□ 0.02
S1PR3Q99500 FITM1-202ENST00000559294 800 ntBASIC15.15■□□□□ 0.02
S1PR3Q99500 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.15■□□□□ 0.02
S1PR3Q99500 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.15■□□□□ 0.02
S1PR3Q99500 GPAT2P1-201ENST00000444924 1672 ntBASIC15.15■□□□□ 0.02
S1PR3Q99500 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.15■□□□□ 0.02
S1PR3Q99500 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.15■□□□□ 0.02
S1PR3Q99500 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
S1PR3Q99500 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.15■□□□□ 0.02
S1PR3Q99500 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
S1PR3Q99500 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.14■□□□□ 0.01
S1PR3Q99500 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
S1PR3Q99500 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
S1PR3Q99500 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 CCR12P-201ENST00000446203 998 ntBASIC15.14■□□□□ 0.01
S1PR3Q99500 MIR3180-5-201ENST00000583743 153 ntBASIC15.14■□□□□ 0.01
S1PR3Q99500 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.14■□□□□ 0.01
S1PR3Q99500 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
S1PR3Q99500 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
S1PR3Q99500 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.14■□□□□ 0.01
S1PR3Q99500 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
S1PR3Q99500 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.13■□□□□ 0.01
S1PR3Q99500 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.13■□□□□ 0.01
S1PR3Q99500 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
S1PR3Q99500 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
S1PR3Q99500 AL390955.1-201ENST00000428694 934 ntBASIC15.13■□□□□ 0.01
S1PR3Q99500 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.13■□□□□ 0.01
S1PR3Q99500 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.13■□□□□ 0.01
S1PR3Q99500 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.13■□□□□ 0.01
S1PR3Q99500 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.13■□□□□ 0.01
S1PR3Q99500 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
S1PR3Q99500 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.13■□□□□ 0.01
S1PR3Q99500 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
S1PR3Q99500 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S1PR3Q99500 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
S1PR3Q99500 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S1PR3Q99500 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
S1PR3Q99500 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms