Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 AC004263.2-201ENST00000617183 678 ntBASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 VENTXP7-201ENST00000475503 772 ntBASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 MIR3180-1-201ENST00000580374 94 ntBASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 MIR3180-3-201ENST00000584616 94 ntBASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP1Q96SZ6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 HCG11-201ENST00000411553 5696 ntBASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP1Q96SZ6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 TSPY12P-201ENST00000421279 868 ntBASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 AL592071.1-201ENST00000611956 408 ntBASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 AC126763.1-201ENST00000552015 2118 ntBASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP1Q96SZ6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 AC246785.2-201ENST00000432512 513 ntBASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 RN7SL606P-201ENST00000472779 293 ntBASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms