Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 AL157888.1-201ENST00000631930 593 ntBASIC21.68■■□□□ 1.06
NEK1Q96PY6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.68■■□□□ 1.06
NEK1Q96PY6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEK1Q96PY6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 AC005521.1-201ENST00000393351 872 ntBASIC21.67■■□□□ 1.06
NEK1Q96PY6 COX11P1-201ENST00000489116 835 ntBASIC21.67■■□□□ 1.06
NEK1Q96PY6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 AC140113.3-201ENST00000605663 199 ntBASIC21.67■■□□□ 1.06
NEK1Q96PY6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NEK1Q96PY6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEK1Q96PY6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.66■■□□□ 1.06
NEK1Q96PY6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.66■■□□□ 1.06
NEK1Q96PY6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.66■■□□□ 1.06
NEK1Q96PY6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.66■■□□□ 1.06
NEK1Q96PY6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.66■■□□□ 1.06
NEK1Q96PY6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEK1Q96PY6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 BX664615.1-201ENST00000443558 458 ntBASIC21.65■■□□□ 1.06
NEK1Q96PY6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 AL441883.1-201ENST00000566170 1045 ntBASIC21.65■■□□□ 1.06
NEK1Q96PY6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEK1Q96PY6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.65■■□□□ 1.06
NEK1Q96PY6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
NEK1Q96PY6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NEK1Q96PY6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms