Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 MIR3917-201ENST00000580971 93 ntBASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 AL445228.2-201ENST00000605589 952 ntBASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 AC024243.1-201ENST00000609234 778 ntBASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 AC092865.7-201ENST00000641832 219 ntBASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPIP1Q96JH7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 AC099343.3-201ENST00000605834 2503 ntBASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPIP1Q96JH7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AC018470.1-201ENST00000624790 3129 ntBASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AL133373.2-201ENST00000623187 2828 ntBASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AC008687.5-201ENST00000593746 558 ntBASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AL138966.2-201ENST00000621997 464 ntBASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPIP1Q96JH7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 AC141257.4-201ENST00000634557 245 ntBASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 AC136944.6-201ENST00000634818 245 ntBASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCPIP1Q96JH7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.27■□□□□ 0.67
VCPIP1Q96JH7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
VCPIP1Q96JH7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VCPIP1Q96JH7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms