Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 CYMP-203ENST00000474680 1263 ntBASIC21.35■■□□□ 1.01
CDCA5Q96FF9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 AP000867.4-201ENST00000641616 219 ntBASIC21.35■■□□□ 1.01
CDCA5Q96FF9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 CLDN5-201ENST00000403084 2357 ntBASIC21.34■■□□□ 1.01
CDCA5Q96FF9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 RFPL4AP1-201ENST00000530883 850 ntBASIC21.34■■□□□ 1.01
CDCA5Q96FF9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA5Q96FF9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 BX005266.1-201ENST00000473402 457 ntBASIC21.33■■□□□ 1.01
CDCA5Q96FF9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCA5Q96FF9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDCA5Q96FF9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA5Q96FF9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.33■■□□□ 1
CDCA5Q96FF9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.33■■□□□ 1
CDCA5Q96FF9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.33■■□□□ 1
CDCA5Q96FF9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA5Q96FF9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.32■■□□□ 1
CDCA5Q96FF9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 MCCD1P2-201ENST00000423228 335 ntBASIC21.32■■□□□ 1
CDCA5Q96FF9 KRT18P2-201ENST00000447938 1258 ntBASIC21.32■■□□□ 1
CDCA5Q96FF9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
CDCA5Q96FF9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.32■■□□□ 1
CDCA5Q96FF9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.32■■□□□ 1
CDCA5Q96FF9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA5Q96FF9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.31■■□□□ 1
CDCA5Q96FF9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
CDCA5Q96FF9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.31■■□□□ 1
CDCA5Q96FF9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.31■■□□□ 1
CDCA5Q96FF9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CDCA5Q96FF9 KRT18P27-201ENST00000427733 1299 ntBASIC21.31■■□□□ 1
CDCA5Q96FF9 KRT18P65-201ENST00000439811 1286 ntBASIC21.31■■□□□ 1
CDCA5Q96FF9 MIR1199-201ENST00000621445 119 ntBASIC21.31■■□□□ 1
CDCA5Q96FF9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms