Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC97Q96F63 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC97Q96F63 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC97Q96F63 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC97Q96F63 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC97Q96F63 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC97Q96F63 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC97Q96F63 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC97Q96F63 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC97Q96F63 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 GPAT2P1-201ENST00000444924 1672 ntBASIC18.67■□□□□ 0.58
CCDC97Q96F63 AC007326.2-201ENST00000624224 7579 ntBASIC18.67■□□□□ 0.58
CCDC97Q96F63 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 UPK3BP1-201ENST00000428678 509 ntBASIC18.67■□□□□ 0.58
CCDC97Q96F63 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 AC006011.2-201ENST00000621313 1158 ntBASIC18.67■□□□□ 0.58
CCDC97Q96F63 AL512353.2-201ENST00000448759 1962 ntBASIC18.67■□□□□ 0.58
CCDC97Q96F63 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC97Q96F63 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC97Q96F63 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.66■□□□□ 0.58
CCDC97Q96F63 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 ECEL1P2-202ENST00000465689 757 ntBASIC18.66■□□□□ 0.58
CCDC97Q96F63 AC022616.7-201ENST00000525383 220 ntBASIC18.66■□□□□ 0.58
CCDC97Q96F63 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC97Q96F63 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC97Q96F63 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC97Q96F63 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC97Q96F63 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms