Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNRNP40Q96DI7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 AC005104.2-201ENST00000427818 678 ntBASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 AC009533.2-201ENST00000543664 586 ntBASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 MTMR9LP-203ENST00000426597 1545 ntBASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SNRNP40Q96DI7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 MIR149-201ENST00000384879 89 ntBASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRNP40Q96DI7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 INTS4P1-201ENST00000438455 1935 ntBASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP40Q96DI7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms