Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.62■□□□□ 0.41
VPS33AQ96AX1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 KRT18P41-201ENST00000518924 1277 ntBASIC17.62■□□□□ 0.41
VPS33AQ96AX1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 KRT18P6-201ENST00000555540 1265 ntBASIC17.62■□□□□ 0.41
VPS33AQ96AX1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 AC008622.2-201ENST00000617006 1229 ntBASIC17.62■□□□□ 0.41
VPS33AQ96AX1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 AL096828.2-201ENST00000567259 1965 ntBASIC17.62■□□□□ 0.41
VPS33AQ96AX1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 AC130371.2-201ENST00000619443 611 ntBASIC17.61■□□□□ 0.41
VPS33AQ96AX1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 AC073648.6-201ENST00000641589 218 ntBASIC17.61■□□□□ 0.41
VPS33AQ96AX1 AL031985.4-201ENST00000642138 673 ntBASIC17.61■□□□□ 0.41
VPS33AQ96AX1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS33AQ96AX1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 FAM207BP-201ENST00000447172 505 ntBASIC17.6■□□□□ 0.41
VPS33AQ96AX1 AC011506.1-201ENST00000474329 610 ntBASIC17.6■□□□□ 0.41
VPS33AQ96AX1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.6■□□□□ 0.41
VPS33AQ96AX1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS33AQ96AX1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms