Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 AC080080.1-201ENST00000625121 2420 ntBASIC16.25■□□□□ 0.19
RFT1Q96AA3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFT1Q96AA3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RFT1Q96AA3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 ID1-201ENST00000376105 1233 ntBASIC16.24■□□□□ 0.19
RFT1Q96AA3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFT1Q96AA3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.24■□□□□ 0.19
RFT1Q96AA3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 AC138028.4-201ENST00000564984 1845 ntBASIC16.23■□□□□ 0.19
RFT1Q96AA3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 KRT8P41-201ENST00000533985 1514 ntBASIC16.23■□□□□ 0.19
RFT1Q96AA3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.23■□□□□ 0.19
RFT1Q96AA3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFT1Q96AA3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.23■□□□□ 0.19
RFT1Q96AA3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.22■□□□□ 0.19
RFT1Q96AA3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFT1Q96AA3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFT1Q96AA3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFT1Q96AA3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RFT1Q96AA3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFT1Q96AA3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFT1Q96AA3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFT1Q96AA3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RFT1Q96AA3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms