Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 TSPY12P-201ENST00000421279 868 ntBASIC16.51■□□□□ 0.23
RNF138Q8WVD3 AL845331.1-201ENST00000424978 1190 ntBASIC16.51■□□□□ 0.23
RNF138Q8WVD3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 MIR3180-1-201ENST00000580374 94 ntBASIC16.51■□□□□ 0.23
RNF138Q8WVD3 MIR3180-3-201ENST00000584616 94 ntBASIC16.51■□□□□ 0.23
RNF138Q8WVD3 AC069148.1-201ENST00000608741 768 ntBASIC16.51■□□□□ 0.23
RNF138Q8WVD3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF138Q8WVD3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 AC068472.1-201ENST00000474589 881 ntBASIC16.5■□□□□ 0.23
RNF138Q8WVD3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 AL592071.1-201ENST00000611956 408 ntBASIC16.5■□□□□ 0.23
RNF138Q8WVD3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF138Q8WVD3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 DRAXINP1-201ENST00000437611 948 ntBASIC16.49■□□□□ 0.23
RNF138Q8WVD3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RNF138Q8WVD3 FLJ13224-201ENST00000313737 1514 ntBASIC16.49■□□□□ 0.23
RNF138Q8WVD3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms