Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CHCHD2P8-201ENST00000429873 447 ntBASIC20.73■□□□□ 0.91
RETREG2Q8NC44 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 UNC93B7-201ENST00000509439 705 ntBASIC20.73■□□□□ 0.91
RETREG2Q8NC44 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 AL390961.4-201ENST00000623958 2535 ntBASIC20.73■□□□□ 0.91
RETREG2Q8NC44 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 KRT18P1-202ENST00000452408 1331 ntBASIC20.73■□□□□ 0.91
RETREG2Q8NC44 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RETREG2Q8NC44 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 BICD1-207ENST00000551848 1962 ntBASIC20.72■□□□□ 0.91
RETREG2Q8NC44 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 KRT17P6-201ENST00000453795 1220 ntBASIC20.72■□□□□ 0.91
RETREG2Q8NC44 SEC1P-202ENST00000473944 940 ntBASIC20.72■□□□□ 0.91
RETREG2Q8NC44 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RETREG2Q8NC44 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 KRT8P10-201ENST00000450021 1447 ntBASIC20.71■□□□□ 0.91
RETREG2Q8NC44 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AL136038.4-201ENST00000603606 1261 ntBASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AC079602.3-201ENST00000623931 403 ntBASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AL157888.1-201ENST00000631930 593 ntBASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.71■□□□□ 0.91
RETREG2Q8NC44 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETREG2Q8NC44 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RETREG2Q8NC44 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.7■□□□□ 0.91
RETREG2Q8NC44 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 ANO7L1-203ENST00000602586 1720 ntBASIC20.7■□□□□ 0.9
RETREG2Q8NC44 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 MIR564-202ENST00000385049 94 ntBASIC20.7■□□□□ 0.9
RETREG2Q8NC44 TSPY22P-201ENST00000427496 604 ntBASIC20.7■□□□□ 0.9
RETREG2Q8NC44 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 HLA-F-220ENST00000434407 884 ntBASIC20.7■□□□□ 0.9
RETREG2Q8NC44 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.7■□□□□ 0.9
RETREG2Q8NC44 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms