Protein–RNA interactions for Protein: Q8N6V4

C10orf53, UPF0728 protein C10orf53, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf53Q8N6V4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 AP000525.1-201ENST00000608286 694 ntBASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C10orf53Q8N6V4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 AC079598.2-202ENST00000546624 1451 ntBASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 KRT17P2-201ENST00000300992 1314 ntBASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 MIR1238-201ENST00000408483 83 ntBASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.81■□□□□ 0.28
C10orf53Q8N6V4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 BICD1-207ENST00000551848 1962 ntBASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 MIR564-202ENST00000385049 94 ntBASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 AL390955.1-201ENST00000428694 934 ntBASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 AP005242.2-201ENST00000580065 1175 ntBASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C10orf53Q8N6V4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C10orf53Q8N6V4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms