Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C11orf42Q8N5U0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 TMPOP1-202ENST00000424642 1267 ntBASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 YBX1P2-201ENST00000489612 999 ntBASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 AC112497.1-201ENST00000624824 639 ntBASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf42Q8N5U0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 KRT18P23-201ENST00000435622 1283 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 SEC1P-202ENST00000473944 940 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 AL441883.1-201ENST00000566170 1045 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 AL023973.1-201ENST00000624619 620 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 AL031432.5-201ENST00000641059 760 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 KRT8P50-201ENST00000562022 1438 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 AC007613.1-201ENST00000572811 2597 ntBASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf42Q8N5U0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.23■□□□□ 0.03
C11orf42Q8N5U0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf42Q8N5U0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
C11orf42Q8N5U0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf42Q8N5U0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf42Q8N5U0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms