Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 HTR7P1-202ENST00000624664 4411 ntBASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TTC9CQ8N5M4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 AP000523.1-201ENST00000398242 1049 ntBASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 AC009947.2-201ENST00000444014 672 ntBASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 SDHAP2-201ENST00000455183 2001 ntBASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC9CQ8N5M4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 AC093677.2-201ENST00000600169 1863 ntBASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TTC9CQ8N5M4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms