Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 USP48-205ENST00000421625 2818 ntTSL 2 BASIC27■■□□□ 1.91
ABCA6Q8N139 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 CALY-203ENST00000368558 825 ntTSL 5 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 MSRA-206ENST00000521209 814 ntTSL 3 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
ABCA6Q8N139 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
ABCA6Q8N139 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 ADK-206ENST00000541550 2222 ntTSL 2 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 ATP6V0CP3-201ENST00000417255 467 ntBASIC26.98■■□□□ 1.91
ABCA6Q8N139 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 AC112698.1-201ENST00000510299 916 ntBASIC26.98■■□□□ 1.91
ABCA6Q8N139 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ABCA6Q8N139 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 MIR1199-201ENST00000621445 119 ntBASIC26.98■■□□□ 1.91
ABCA6Q8N139 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 ORC5-208ENST00000626700 344 ntTSL 3 BASIC26.98■■□□□ 1.91
ABCA6Q8N139 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA6Q8N139 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA6Q8N139 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA6Q8N139 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC26.97■■□□□ 1.91
ABCA6Q8N139 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA6Q8N139 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 LINC00602-201ENST00000629776 2065 ntBASIC26.96■■□□□ 1.91
ABCA6Q8N139 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 PNMT-202ENST00000394246 821 ntTSL 2 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 AC006557.2-201ENST00000592985 1240 ntBASIC26.96■■□□□ 1.91
ABCA6Q8N139 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 LINC01126-201ENST00000623515 1646 ntBASIC26.96■■□□□ 1.91
ABCA6Q8N139 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA6Q8N139 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA6Q8N139 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
ABCA6Q8N139 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
ABCA6Q8N139 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.95■■□□□ 1.91
ABCA6Q8N139 AL035633.1-201ENST00000406139 838 ntBASIC26.95■■□□□ 1.91
ABCA6Q8N139 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC26.95■■□□□ 1.91
ABCA6Q8N139 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC26.95■■□□□ 1.91
ABCA6Q8N139 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC26.95■■□□□ 1.91
ABCA6Q8N139 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
ABCA6Q8N139 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.95■■□□□ 1.91
ABCA6Q8N139 AC136632.2-201ENST00000512891 861 ntBASIC26.95■■□□□ 1.91
ABCA6Q8N139 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC26.95■■□□□ 1.9
ABCA6Q8N139 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC26.95■■□□□ 1.9
ABCA6Q8N139 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.95■■□□□ 1.9
ABCA6Q8N139 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA6Q8N139 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA6Q8N139 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA6Q8N139 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms