Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 MCCD1P1-208ENST00000445732 328 ntBASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 NUDT16P1-203ENST00000513809 620 ntBASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 AC096733.2-201ENST00000609937 1394 ntBASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 AC098590.1-201ENST00000468126 897 ntBASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 DGCR10-201ENST00000609839 495 ntBASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC50Q8IVM0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 RPS2P55-201ENST00000397318 883 ntBASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 AL023284.2-201ENST00000405850 579 ntBASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 AC107956.1-201ENST00000494359 873 ntBASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 AC097488.1-201ENST00000507834 756 ntBASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC50Q8IVM0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC50Q8IVM0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC50Q8IVM0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC50Q8IVM0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
CCDC50Q8IVM0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC50Q8IVM0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC50Q8IVM0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 UBE2SP1-201ENST00000450587 669 ntBASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 AC116562.2-201ENST00000507042 360 ntBASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 AP001412.1-201ENST00000608405 714 ntBASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC50Q8IVM0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms