Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AC022616.7-201ENST00000525383 220 ntBASIC17.18■□□□□ 0.34
CCDC71Q8IV32 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AC139887.4-201ENST00000607877 719 ntBASIC17.18■□□□□ 0.34
CCDC71Q8IV32 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 AC063952.2-201ENST00000498792 1227 ntBASIC17.17■□□□□ 0.34
CCDC71Q8IV32 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 AC099398.1-201ENST00000567919 2776 ntBASIC17.17■□□□□ 0.34
CCDC71Q8IV32 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71Q8IV32 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 SLC25A1P2-201ENST00000430693 912 ntBASIC17.16■□□□□ 0.34
CCDC71Q8IV32 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71Q8IV32 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms