Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM90A1Q86YD7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 PVRIG2P-201ENST00000435460 978 ntBASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 AC112907.2-201ENST00000448639 330 ntBASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 NTF6B-201ENST00000591913 560 ntBASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 AL590326.2-201ENST00000625139 305 ntBASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 ESPNP-201ENST00000270691 2015 ntBASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FAM90A1Q86YD7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 MIR1224-201ENST00000408193 85 ntBASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 AC092597.1-201ENST00000487352 616 ntBASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 AC079602.3-201ENST00000623931 403 ntBASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
FAM90A1Q86YD7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FAM90A1Q86YD7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms