Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NSUN5P2-203ENST00000457352 1529 ntBASIC20.39■□□□□ 0.85
TRIM50Q86XT4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM50Q86XT4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 AC079781.3-201ENST00000449110 356 ntBASIC20.38■□□□□ 0.85
TRIM50Q86XT4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 AL031008.1-201ENST00000619963 541 ntBASIC20.38■□□□□ 0.85
TRIM50Q86XT4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM50Q86XT4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 AC112777.1-201ENST00000540175 1423 ntBASIC20.37■□□□□ 0.85
TRIM50Q86XT4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 AC120498.9-201ENST00000339021 3867 ntBASIC20.37■□□□□ 0.85
TRIM50Q86XT4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM50Q86XT4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 NUS1P2-201ENST00000417358 873 ntBASIC20.36■□□□□ 0.85
TRIM50Q86XT4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 FAAHP1-202ENST00000446499 1238 ntBASIC20.36■□□□□ 0.85
TRIM50Q86XT4 FDX1P1-201ENST00000449115 551 ntBASIC20.36■□□□□ 0.85
TRIM50Q86XT4 AC009078.2-202ENST00000463353 338 ntBASIC20.36■□□□□ 0.85
TRIM50Q86XT4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM50Q86XT4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM50Q86XT4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms