Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 C2orf69P4-201ENST00000565394 541 ntBASIC15.24■□□□□ 0.03
ZNF546Q86UE3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 NTF6G-201ENST00000591094 616 ntBASIC15.24■□□□□ 0.03
ZNF546Q86UE3 AC008694.1-202ENST00000636953 945 ntBASIC15.24■□□□□ 0.03
ZNF546Q86UE3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.24■□□□□ 0.03
ZNF546Q86UE3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 AC112777.1-201ENST00000540175 1423 ntBASIC15.24■□□□□ 0.03
ZNF546Q86UE3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 NFIC-211ENST00000641145 8399 ntBASIC15.23■□□□□ 0.03
ZNF546Q86UE3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.23■□□□□ 0.03
ZNF546Q86UE3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 MIR638-201ENST00000385237 100 ntBASIC15.23■□□□□ 0.03
ZNF546Q86UE3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
ZNF546Q86UE3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 PKD1P5-201ENST00000532415 10291 ntBASIC15.22■□□□□ 0.03
ZNF546Q86UE3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 AC068338.2-201ENST00000563278 1430 ntBASIC15.22■□□□□ 0.03
ZNF546Q86UE3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 AC006116.8-202ENST00000587620 1550 ntBASIC15.22■□□□□ 0.03
ZNF546Q86UE3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF546Q86UE3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms