Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 AC009533.2-201ENST00000543664 586 ntBASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13BQ7Z7G8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 AC004832.2-201ENST00000426397 482 ntBASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 NUS1P2-201ENST00000417358 873 ntBASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 AL138831.2-201ENST00000606564 490 ntBASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13BQ7Z7G8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 RPS8P6-201ENST00000426177 609 ntBASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 OR7E14P-202ENST00000530490 1290 ntBASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 SPCS2P1-201ENST00000561636 679 ntBASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 MTDHP3-201ENST00000594186 672 ntBASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 AC023274.1-201ENST00000418278 595 ntBASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 HLA-J-203ENST00000494367 1087 ntBASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
VPS13BQ7Z7G8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 SDHAP2-201ENST00000455183 2001 ntBASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 RCN1P2-201ENST00000398357 915 ntBASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13BQ7Z7G8 BCRP1-201ENST00000444246 691 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms