Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 AC128676.1-201ENST00000454392 318 ntBASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCHD4Q6ZW05 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 SIRPAP1-201ENST00000448467 1770 ntBASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 RPS2P4-201ENST00000476944 856 ntBASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 AC131212.4-201ENST00000623606 975 ntBASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 HTR7P1-201ENST00000538670 1336 ntBASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTCHD4Q6ZW05 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 AC008556.1-201ENST00000610908 2040 ntBASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTCHD4Q6ZW05 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.85■□□□□ 0.29
PTCHD4Q6ZW05 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms